/*****************************************************************************

File name: indel_std.h

Author: Manami Nishizawa

Contents: The header file of standard handling and definition

Date:  May 30,2000

******************************************************************************/

#ifndef __INDEL_STD_H
#define __INDEL_STD_H


#include <stdio.h>
#include <stdlib.h>
#include <conio.h>
#include <ctype.h>
#include <string.h>
#include <math.h>
#include <time.h>

/*type definition*/
#define  PNTR   *
#define  Uint1  unsigned char
#define  Uint1Ptr  unsigned char PNTR

#define  MAX(x,y)  ((x)>(y)? (x) : (y))
#define  MIN(x,y)  ((x)>(y)? (y) : (x))
#define  SIGN(a)  ((a)>0? 1 : ((a)<0? -1 : 0))
#define  ABS(x)    ((x)>0? (x) : -(x))


#define   INT4_MAX    32767
#define   LONG_MAX    2147483647
#define   LONG_MIN    -2147483647

/*function*/
/*mem*/
extern void * MemFree(void *ptr);
extern char *StringSave(const char *str);

/*ASCII to Uint1*/
Uint1 ASCIIToBASEs(char base);
char BASEsToASCII(Uint1 A);
Uint1 ASCIIToAA(char amino, short alphabet_code);
char AAToASCII(Uint1 A, short alphabet_code);
/*simple function*/
void error (char * message);
int xtoy (double x[], double y[], int n);
int	round(double x);
/*random*/
void SetSeed (int seed);
double rndu (void);
double  RandomReal(double low,double high);
int  RandomInteger(int low, int high);
double rndnorm (void);
int rndpoisson (double m);
double rndgamma (double s);
double LnGamma (double x);

#endif